"Automatic Language-Agnostic Subtitle Synchronization"

Randomly subsample sequencing reads or alignments

A native policy enforcement layer for AI coding agents. Built on OPA/Rego.

Creating alignment plots from bam files

Split k-mer analysis – version 2

Optimal sequence-to-graph alignment with recombinations

A fast terminal-based viewer and command-line toolkit for molecular sequences (DNA, AA). View, translate, convert (to FASTA), and combine sequences aligned or not — all from the terminal.

An ultrafast and memory efficient tool for phylogenomics

Compute a pairwise SNP distance matrix from one or two alignment(s)

A view wrapper for gyscos/cursive views which aligns child views 🖥️

Host depletion optimised for clinical metagenomic sequencing applications 🐼

A CLI for pairwise alignment of sequences, using both normal and mass based alignment.

Rust-based 3D point cloud alignment

SIMD aligned data structures to work with `std::simd`.

Rust implementation of ekg's dozyg

Rust bindings for the abPOA partial order aligner

A command-line utility which aligns a block of text within the terminal (or a specified number of columns), written in Rust.

A lightweight wrapper to run minimap2 (v2.30) alignments directly on BAM file

ARYCAL: across run DIA-MS extracted ion chromatogram alignment written in Rust

Padding/aligning values without heap allocation